©2018 by Brazilian Microbiome Project.

BIOINFORMATICS - DATA ANALYZES

Since the introduction of next-generationsequencing (NGS) scientists have generated an unprecedented amount of genomic information. However, our ability to comprehensively analyze this huge amount of data is still limited, which makes bioinformatics one of the main bottlenecks in microbiome studies. Here, we provide a set of user-friendly pipelines for microbiome data analyzes.

 

TARGET SEQUENCING (16S/18S/ITS)

Data analyzes of microbial phylogenetic marker genes, e.g., rRNA 16S/18 and ITS
(metataxonomics)

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METAGENOMICS

Total DNA sequencing ("shotgun") to analyze the potential functional traits.


Gene centric and genome centric approaches.

CO-OCCURRENCE NETWORK ANALYSIS

Co-occurrence Network Analysis

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